PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0282s0070.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family ERF
Protein Properties Length: 219aa    MW: 24096.7 Da    PI: 5.1529
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0282s0070.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.74.5e-1659108255
                     AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                              y+GVr +    +Wv+e+r+p   +k+ r++lg++ tae+Aa+a++ a+++++g
  SapurV1A.0282s0070.1.p  59 IYRGVRKRN-GDKWVCELREP---NKKSRIWLGTYPTAEMAARAHDVAALAFRG 108
                             69****887.8*********8...347************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.16E-2858118No hitNo description
PfamPF008479.3E-1258108IPR001471AP2/ERF domain
SMARTSM003801.4E-2859122IPR001471AP2/ERF domain
SuperFamilySSF541711.37E-2059118IPR016177DNA-binding domain
PROSITE profilePS5103222.03659116IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.1E-3059118IPR001471AP2/ERF domain
PRINTSPR003676.3E-86071IPR001471AP2/ERF domain
PRINTSPR003676.3E-88298IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    Send to blast
MALAGSSSFS ADRQESSLLS DSSGSQQDSP SSNEEVLLAT SHPKRRAGRR IFKETRHPIY  60
RGVRKRNGDK WVCELREPNK KSRIWLGTYP TAEMAARAHD VAALAFRGKS ACLNFADSAW  120
RLPAPISNEA KDIRRAASEA AELCRTSDFG EVCSSSNDDI RNLPSENVGY IDEDAEFNMP  180
GLLANMAEGL LLSPPHYTGD SLNWSDCEID VDWSLWSI*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00002PBMTransfer from 475045Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ0199341e-164KJ019934.1 Populus nigra genotype N26 dehydration-responsive element binding protein (DREB69) gene, complete cds.
GenBankKJ0199351e-164KJ019935.1 Populus nigra genotype N27 dehydration-responsive element binding protein (DREB69) gene, complete cds.
GenBankKJ0199361e-164KJ019936.1 Populus nigra genotype N96 dehydration-responsive element binding protein (DREB69) gene, complete cds.
GenBankKJ0199371e-164KJ019937.1 Populus nigra genotype N100 dehydration-responsive element binding protein (DREB69) gene, complete cds.
GenBankKJ0199381e-164KJ019938.1 Populus nigra genotype N103 dehydration-responsive element binding protein (DREB69) gene, complete cds.
GenBankKJ0199401e-164KJ019940.1 Populus nigra genotype N111 dehydration-responsive element binding protein (DREB69) gene, complete cds.
GenBankKJ0199411e-164KJ019941.1 Populus nigra genotype N116 dehydration-responsive element binding protein (DREB69) gene, complete cds.
GenBankKJ0199421e-164KJ019942.1 Populus nigra genotype N117 dehydration-responsive element binding protein (DREB69) gene, complete cds.
GenBankKJ0199431e-164KJ019943.1 Populus nigra genotype N119 dehydration-responsive element binding protein (DREB69) gene, complete cds.
GenBankKJ0199441e-164KJ019944.1 Populus nigra genotype N124 dehydration-responsive element binding protein (DREB69) gene, complete cds.
GenBankKJ0199451e-164KJ019945.1 Populus nigra genotype N126 dehydration-responsive element binding protein (DREB69) gene, complete cds.
GenBankKJ0199461e-164KJ019946.1 Populus nigra genotype N127 dehydration-responsive element binding protein (DREB69) gene, complete cds.
GenBankKJ0199471e-164KJ019947.1 Populus nigra genotype N45 dehydration-responsive element binding protein (DREB69) gene, complete cds.
GenBankKJ0199481e-164KJ019948.1 Populus nigra genotype N46 dehydration-responsive element binding protein (DREB69) gene, complete cds.
GenBankKJ0199501e-164KJ019950.1 Populus nigra genotype E002 dehydration-responsive element binding protein (DREB69) gene, complete cds.
GenBankKJ0199511e-164KJ019951.1 Populus nigra genotype N50 dehydration-responsive element binding protein (DREB69) gene, complete cds.
GenBankKJ0199521e-164KJ019952.1 Populus nigra genotype N51 dehydration-responsive element binding protein (DREB69) gene, complete cds.
GenBankKJ0199531e-164KJ019953.1 Populus nigra genotype N85 dehydration-responsive element binding protein (DREB69) gene, complete cds.
GenBankKJ0199541e-164KJ019954.1 Populus nigra genotype W001 dehydration-responsive element binding protein (DREB69) gene, complete cds.
GenBankKJ0199581e-164KJ019958.1 Populus nigra genotype W009 dehydration-responsive element binding protein (DREB69) gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011029177.11e-124PREDICTED: dehydration-responsive element-binding protein 1E
SwissprotQ9SYS65e-65DRE1C_ARATH; Dehydration-responsive element-binding protein 1C
TrEMBLV9PCD41e-124V9PCD4_POPEU; C-repeat binding factor 2
STRINGPOPTR_0001s08720.11e-121(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24333224
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.15e-65C-repeat/DRE binding factor 2